IL_9Q2M_202
3D structure
- PDB id
- 9Q2M (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit ribosomal 80S elongation complex with eEF2, partial P site Ala-tRNA, E site Ala-tRNA on NediV ORF
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- GAG*CGAGGAUC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9Q2M_202 not in the Motif Atlas
- Homologous match to IL_9PN5_168
- Geometric discrepancy: 0.2182
- The information below is about IL_9PN5_168
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_02511.3
- Basepair signature
- cWW-tSH-L-cWW-L-L-R-L
- Number of instances in this motif group
- 4
Unit IDs
9Q2M|1|9|G|487
9Q2M|1|9|A|488
9Q2M|1|9|G|489
*
9Q2M|1|9|C|509
9Q2M|1|9|G|510
9Q2M|1|9|A|511
9Q2M|1|9|G|512
9Q2M|1|9|G|513
9Q2M|1|9|A|514
9Q2M|1|9|U|515
9Q2M|1|9|C|516
Current chains
- Chain 9
- 18S rRNA
Nearby chains
- Chain JJ
- 40S ribosomal protein S9
- Chain YY
- 40S ribosomal protein S24
- Chain ee
- Small ribosomal subunit protein eS30
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