IL_9Q2M_207

3D structure

PDB id

9Q2M (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit ribosomal 80S elongation complex with eEF2, partial P site Ala-tRNA, E site Ala-tRNA on NediV ORF

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CGUAG*UCAAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Q2M|1|9|C|600
9Q2M|1|9|G|601
9Q2M|1|9|U|602
9Q2M|1|9|A|603
9Q2M|1|9|G|604
*
9Q2M|1|9|U|872
9Q2M|1|9|C|873
9Q2M|1|9|A|874
9Q2M|1|9|A|875
9Q2M|1|9|G|876

Current chains

Chain 9

18S rRNA

Nearby chains

Chain 5

Large subunit ribosomal RNA; LSU rRNA

Chain LL

Small ribosomal subunit protein uS17

Chain NN

40S ribosomal protein S13

Chain WW

40S ribosomal protein S15a

Chain XX

40S ribosomal protein S23