IL_9Q2M_242

3D structure

PDB id

9Q2M (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit ribosomal 80S elongation complex with eEF2, partial P site Ala-tRNA, E site Ala-tRNA on NediV ORF

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CCU*GCG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Q2M|1|9|C|1246
9Q2M|1|9|C|1247
9Q2M|1|9|U|1248
*
9Q2M|1|9|G|1532
9Q2M|1|9|C|1533
9Q2M|1|9|G|1534

Current chains

Chain 9

18S rRNA

Nearby chains

Chain ET

Transfer RNA; tRNA

Chain QQ

Small ribosomal subunit protein uS9

Chain SS

40S ribosomal protein S18

Chain TT

Small ribosomal subunit protein eS19

Chain UU

40S ribosomal protein S20