IL_9Q2P_085

3D structure

PDB id

9Q2P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit ribosomal 80S elongation complex with eEF1A, A*/T Ala-tRNA, P site Ala-tRNA, E site Ala-tRNA on NediV ORF

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UAUAGACAG*CCGAA

Length

14 nucleotides

Bulged bases

9Q2P|1|5|A|1960

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Q2P|1|5|U|1957
9Q2P|1|5|A|1958
9Q2P|1|5|U|1959
9Q2P|1|5|A|1960
9Q2P|1|5|G|1961
9Q2P|1|5|A|1962
9Q2P|1|5|C|1963
9Q2P|1|5|A|1964
9Q2P|1|5|G|1965
*
9Q2P|1|5|C|2022
9Q2P|1|5|C|2023
9Q2P|1|5|G|2024
9Q2P|1|5|A|2025
9Q2P|1|5|A|2026

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain m

Large ribosomal subunit protein eL40

Chain s

60S acidic ribosomal protein P0