IL_9Q2P_108
3D structure
- PDB id
- 9Q2P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit ribosomal 80S elongation complex with eEF1A, A*/T Ala-tRNA, P site Ala-tRNA, E site Ala-tRNA on NediV ORF
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GGAAGUCGG*CUGUC
- Length
- 14 nucleotides
- Bulged bases
- 9Q2P|1|5|G|3839
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9Q2P_108 not in the Motif Atlas
- Geometric match to IL_8GLP_305
- Geometric discrepancy: 0.1148
- The information below is about IL_8GLP_305
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_80252.3
- Basepair signature
- cWW-tSH-cWW-tHW-R-L-cWW-L-L-R
- Number of instances in this motif group
- 11
Unit IDs
9Q2P|1|5|G|2847
9Q2P|1|5|G|2848
9Q2P|1|5|A|2849
9Q2P|1|5|A|2850
9Q2P|1|5|G|2851
9Q2P|1|5|U|2852
9Q2P|1|5|C|2853
9Q2P|1|5|G|2854
9Q2P|1|5|G|2855
*
9Q2P|1|5|C|3837
9Q2P|1|5|U|3838
9Q2P|1|5|G|3839
9Q2P|1|5|U|3840
9Q2P|1|5|C|3841
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain B
- 60S ribosomal protein L3
- Chain V
- Large ribosomal subunit protein uL14
Coloring options: