IL_9Q3Q_104
3D structure
- PDB id
- 9Q3Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of translating Escherichia coli 70S ribosome bound to mRNA, P-site QKF-peptidyl-tRNAPhe, glycyl-tRNAGly in A/T conformation, EF-Tu-GDP, and bottromycin at 2.01A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.01 Å
Loop
- Sequence
- UGUUC*GGUAG
- Length
- 10 nucleotides
- Bulged bases
- 9Q3Q|1|A|U|2689, 9Q3Q|1|A|U|2690
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9Q3Q_104 not in the Motif Atlas
- Homologous match to IL_8B0X_163
- Geometric discrepancy: 0.0314
- The information below is about IL_8B0X_163
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_82016.1
- Basepair signature
- cWW-L-tHS-L-cWW
- Number of instances in this motif group
- 4
Unit IDs
9Q3Q|1|A|U|2687
9Q3Q|1|A|G|2688
9Q3Q|1|A|U|2689
9Q3Q|1|A|U|2690
9Q3Q|1|A|C|2691
*
9Q3Q|1|A|G|2718
9Q3Q|1|A|G|2719
9Q3Q|1|A|U|2720
9Q3Q|1|A|A|2721
9Q3Q|1|A|G|2722
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain D
- 50S ribosomal protein L3
- Chain P
- Large ribosomal subunit protein bL17
- Chain R
- Large ribosomal subunit protein bL19
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