IL_9Q3R_142
3D structure
- PDB id
- 9Q3R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Escherichia coli 70S ribosome bound to mRNA, P-site fMet-tRNAfMet, glycyl-tRNAGly in A/T conformation, EF-Tu-GDPCP, and bottromycin at 1.99A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.99 Å
Loop
- Sequence
- CGUAAAG*CG
- Length
- 9 nucleotides
- Bulged bases
- 9Q3R|1|a|A|572
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9Q3R_142 not in the Motif Atlas
- Homologous match to IL_8B0X_025
- Geometric discrepancy: 0.0329
- The information below is about IL_8B0X_025
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_20847.3
- Basepair signature
- cWW-L-cWW-L-L-R
- Number of instances in this motif group
- 6
Unit IDs
9Q3R|1|a|C|569
9Q3R|1|a|G|570
9Q3R|1|a|U|571
9Q3R|1|a|A|572
9Q3R|1|a|A|573
9Q3R|1|a|A|574
9Q3R|1|a|G|575
*
9Q3R|1|a|C|880
9Q3R|1|a|G|881
Current chains
- Chain a
- 16S Ribosomal RNA
Nearby chains
- Chain h
- Small ribosomal subunit protein uS8
- Chain l
- Small ribosomal subunit protein uS12
- Chain q
- Small ribosomal subunit protein uS17
Coloring options: