IL_9Q6S_221
3D structure
- PDB id
- 9Q6S (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with pleuromutilin-30 triazole derivative and protein Y at 2.90A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- AUGAGUAA*UGAAAUU
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9Q6S_221 not in the Motif Atlas
- Homologous match to IL_7A0S_045
- Geometric discrepancy: 0.0941
- The information below is about IL_7A0S_045
- Detailed Annotation
- 8x7 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_62167.6
- Basepair signature
- cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 17
Unit IDs
9Q6S|1|2A|A|1262
9Q6S|1|2A|U|1263
9Q6S|1|2A|G|1264
9Q6S|1|2A|A|1265
9Q6S|1|2A|G|1266
9Q6S|1|2A|U|1267
9Q6S|1|2A|A|1268
9Q6S|1|2A|A|1269
*
9Q6S|1|2A|U|2011
9Q6S|1|2A|G|2012
9Q6S|1|2A|A|2013
9Q6S|1|2A|A|2014
9Q6S|1|2A|A|2015
9Q6S|1|2A|U|2016
9Q6S|1|2A|U|2017
Current chains
- Chain 2A
- 23S Ribosomal RNA
Nearby chains
- Chain 25
- 50S ribosomal protein L32
- Chain 2F
- 50S ribosomal protein L4
- Chain 2W
- 50S ribosomal protein L22
Coloring options: