IL_9Q6T_040

3D structure

PDB id

9Q6T (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with tiamulin and protein Y at 2.65A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.65 Å

Loop

Sequence

GAUG*CGC

Length

7 nucleotides

Bulged bases

9Q6T|1|1A|U|1033

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9Q6T_040 not in the Motif Atlas

Homologous match to IL_8B0X_102

Geometric discrepancy: 0.0731

The information below is about IL_8B0X_102

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_19025.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

36

Unit IDs

9Q6T|1|1A|G|1031
9Q6T|1|1A|A|1032
9Q6T|1|1A|U|1033
9Q6T|1|1A|G|1034
*
9Q6T|1|1A|C|1121
9Q6T|1|1A|G|1122
9Q6T|1|1A|C|1123

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains

Chain 19

50S ribosomal protein L36

Chain 1H

50S ribosomal protein L6

Chain 1Q

50S ribosomal protein L16