IL_9Q6U_185

3D structure

PDB id

9Q6U (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with tiamulin-26 triazole derivative and protein Y at 2.80A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

UAG*CGAAA

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9Q6U_185 not in the Motif Atlas

Homologous match to IL_8B0X_074

Geometric discrepancy: 0.1584

The information below is about IL_8B0X_074

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_76658.1

Basepair signature

cWW-L-R-cSH-cWW

Number of instances in this motif group

4

Unit IDs

9Q6U|1|2A|U|293
9Q6U|1|2A|A|294
9Q6U|1|2A|G|295
*
9Q6U|1|2A|C|343
9Q6U|1|2A|G|344
9Q6U|1|2A|A|345
9Q6U|1|2A|A|346
9Q6U|1|2A|A|347

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 2Y

50S ribosomal protein L24