3D structure

PDB id
9Q7Q (explore in PDB, NAKB, or RNA 3D Hub)
Description
ABCE1-eRF1-RNC-AMD1C
Experimental method
ELECTRON MICROSCOPY
Resolution
2.86 Å

Loop

Sequence
CUC*GUGAG
Length
8 nucleotides
Bulged bases
9Q7Q|1|5|G|4522, 9Q7Q|1|5|A|4523
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9Q7Q|1|5|C|4456
9Q7Q|1|5|U|4457
9Q7Q|1|5|C|4458
*
9Q7Q|1|5|G|4520
9Q7Q|1|5|U|4521
9Q7Q|1|5|G|4522
9Q7Q|1|5|A|4523
9Q7Q|1|5|G|4524

Current chains

Chain 5
28S rRNA

Nearby chains

Chain 1
AMD1 C-tail
Chain B
Ribosomal protein L3
Chain RF
Eukaryotic peptide chain release factor subunit 1
Chain V
Ribosomal protein L23

Coloring options:

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