3D structure

PDB id
9Q7Q (explore in PDB, NAKB, or RNA 3D Hub)
Description
ABCE1-eRF1-RNC-AMD1C
Experimental method
ELECTRON MICROSCOPY
Resolution
2.86 Å

Loop

Sequence
CUCAGUAC*GGAACCG
Length
15 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9Q7Q|1|5|C|4596
9Q7Q|1|5|U|4597
9Q7Q|1|5|C|4598
9Q7Q|1|5|A|4599
9Q7Q|1|5|G|4600
9Q7Q|1|5|U|4601
9Q7Q|1|5|A|4602
9Q7Q|1|5|C|4603
*
9Q7Q|1|5|G|4608
9Q7Q|1|5|G|4609
9Q7Q|1|5|A|4610
9Q7Q|1|5|A|4611
9Q7Q|1|5|C|4612
9Q7Q|1|5|C|4613
9Q7Q|1|5|G|4614

Current chains

Chain 5
28S rRNA

Nearby chains

Chain AB
ATP binding cassette subfamily E member 1
Chain B
Ribosomal protein L3
Chain H
60S ribosomal protein L9
Chain V
Ribosomal protein L23
Chain m
Ubiquitin-ribosomal protein eL40 fusion protein

Coloring options:

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