IL_9Q7Q_136
3D structure
- PDB id
- 9Q7Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- ABCE1-eRF1-RNC-AMD1C
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.86 Å
Loop
- Sequence
- CUCAGUAC*GGAACCG
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9Q7Q_136 not in the Motif Atlas
- Homologous match to IL_9AXU_109
- Geometric discrepancy: 0.1896
- The information below is about IL_9AXU_109
- Detailed Annotation
- 8x7 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_62167.6
- Basepair signature
- cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 17
Unit IDs
9Q7Q|1|5|C|4596
9Q7Q|1|5|U|4597
9Q7Q|1|5|C|4598
9Q7Q|1|5|A|4599
9Q7Q|1|5|G|4600
9Q7Q|1|5|U|4601
9Q7Q|1|5|A|4602
9Q7Q|1|5|C|4603
*
9Q7Q|1|5|G|4608
9Q7Q|1|5|G|4609
9Q7Q|1|5|A|4610
9Q7Q|1|5|A|4611
9Q7Q|1|5|C|4612
9Q7Q|1|5|C|4613
9Q7Q|1|5|G|4614
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain AB
- ATP binding cassette subfamily E member 1
- Chain B
- Ribosomal protein L3
- Chain H
- 60S ribosomal protein L9
- Chain V
- Ribosomal protein L23
- Chain m
- Ubiquitin-ribosomal protein eL40 fusion protein
Coloring options: