IL_9Q7Q_144

3D structure

PDB id

9Q7Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

ABCE1-eRF1-RNC-AMD1C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.86 Å

Loop

Sequence

UCCC*GUCA

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9Q7Q_144 not in the Motif Atlas

Geometric match to IL_4XW0_002

Geometric discrepancy: 0.23

The information below is about IL_4XW0_002

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_71194.5

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

43

Unit IDs

9Q7Q|1|5|U|4885
9Q7Q|1|5|C|4886
9Q7Q|1|5|C|4887
9Q7Q|1|5|C|4888
*
9Q7Q|1|5|G|4931
9Q7Q|1|5|U|4932
9Q7Q|1|5|C|4933
9Q7Q|1|5|A|4934

Current chains

Chain 5

28S rRNA

Nearby chains

Chain E

60S ribosomal protein L6

Chain M

Large ribosomal subunit protein eL14