IL_9Q7Q_171
3D structure
- PDB id
- 9Q7Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- ABCE1-eRF1-RNC-AMD1C
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.86 Å
Loop
- Sequence
- UUCCUUU*AUUCGA
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9Q7Q_171 not in the Motif Atlas
- Geometric match to IL_9VSN_001
- Geometric discrepancy: 0.3261
- The information below is about IL_9VSN_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_33025.1
- Basepair signature
- cWW-cWW-L-R-L-R-L-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
9Q7Q|1|K|U|115
9Q7Q|1|K|U|116
9Q7Q|1|K|C|117
9Q7Q|1|K|C|118
9Q7Q|1|K|U|119
9Q7Q|1|K|U|120
9Q7Q|1|K|U|121
*
9Q7Q|1|K|A|343
9Q7Q|1|K|U|344
9Q7Q|1|K|U|345
9Q7Q|1|K|C|346
9Q7Q|1|K|G|347
9Q7Q|1|K|A|348
Current chains
- Chain K
- 18S rRNA
Nearby chains
- Chain CC
- eS8
- Chain EE
- Ribosomal protein S11
- Chain x
- Small ribosomal subunit protein eS4
Coloring options: