IL_9Q7Q_176

3D structure

PDB id

9Q7Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

ABCE1-eRF1-RNC-AMD1C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.86 Å

Loop

Sequence

UAUCAA*UGACCACG

Length

14 nucleotides

Bulged bases

9Q7Q|1|K|U|361, 9Q7Q|1|K|C|399, 9Q7Q|1|K|C|400

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Q7Q|1|K|U|359
9Q7Q|1|K|A|360
9Q7Q|1|K|U|361
9Q7Q|1|K|C|362
9Q7Q|1|K|A|363
9Q7Q|1|K|A|364
*
9Q7Q|1|K|U|396
9Q7Q|1|K|G|397
9Q7Q|1|K|A|398
9Q7Q|1|K|C|399
9Q7Q|1|K|C|400
9Q7Q|1|K|A|401
9Q7Q|1|K|C|402
9Q7Q|1|K|G|403

Current chains

Chain K

18S rRNA

Nearby chains

Chain 5

Large subunit ribosomal RNA; LSU rRNA

Chain CC

eS8

Chain EE

Ribosomal protein S11

Chain VV

uS12