IL_9Q7Q_180
3D structure
- PDB id
- 9Q7Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- ABCE1-eRF1-RNC-AMD1C
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.86 Å
Loop
- Sequence
- CAU*AAG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9Q7Q_180 not in the Motif Atlas
- Homologous match to IL_9PN5_163
- Geometric discrepancy: 0.1101
- The information below is about IL_9PN5_163
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_19025.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 36
Unit IDs
9Q7Q|1|K|C|459
9Q7Q|1|K|A|460
9Q7Q|1|K|U|461
*
9Q7Q|1|K|A|468
9Q7Q|1|K|A|469
9Q7Q|1|K|G|470
Current chains
- Chain K
- 18S rRNA
Nearby chains
- Chain AB
- ATP binding cassette subfamily E member 1
- Chain NN
- Small ribosomal subunit protein eS24
- Chain V
- Ribosomal protein L23
- Chain z
- 40S ribosomal protein S6
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