IL_9Q7Q_205

3D structure

PDB id

9Q7Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

ABCE1-eRF1-RNC-AMD1C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.86 Å

Loop

Sequence

UAU*AGA

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9Q7Q_205 not in the Motif Atlas

Geometric match to IL_4RBZ_002

Geometric discrepancy: 0.1824

The information below is about IL_4RBZ_002

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_01003.7

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

240

Unit IDs

9Q7Q|1|K|U|943
9Q7Q|1|K|A|944
9Q7Q|1|K|U|945
*
9Q7Q|1|K|A|981
9Q7Q|1|K|G|982
9Q7Q|1|K|A|983

Current chains

Chain K

18S rRNA

Nearby chains

Chain A

Ribosomal protein L8

Chain MM

Small ribosomal subunit protein uS11

Chain u

40S ribosomal protein S3a