IL_9QEG_073
3D structure
- PDB id
- 9QEG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the 70S ribosome of a MLSb sensitive S. aureus strain "KES34" in complex with solithromycin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.21 Å
Loop
- Sequence
- CAG*CAUAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9QEG_073 not in the Motif Atlas
- Homologous match to IL_4WF9_086
- Geometric discrepancy: 0.3878
- The information below is about IL_4WF9_086
- Detailed Annotation
- Isolated tHS basepair with bulges
- Broad Annotation
- No text annotation
- Motif group
- IL_14250.1
- Basepair signature
- cWW-tSH-L-cWW-L
- Number of instances in this motif group
- 10
Unit IDs
9QEG|1|A|C|2324
9QEG|1|A|A|2325
9QEG|1|A|G|2326
*
9QEG|1|A|C|2344
9QEG|1|A|A|2345
9QEG|1|A|U|2346
9QEG|1|A|A|2347
9QEG|1|A|G|2348
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain B
- 5S ribosomal RNA; 5S rRNA
- Chain F
- Large ribosomal subunit protein uL5
- Chain M
- Large ribosomal subunit protein uL18
Coloring options: