IL_9QEG_074

3D structure

PDB id

9QEG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the 70S ribosome of a MLSb sensitive S. aureus strain "KES34" in complex with solithromycin

Experimental method

ELECTRON MICROSCOPY

Resolution

2.21 Å

Loop

Sequence

CGAG*CGAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9QEG_074 not in the Motif Atlas

Homologous match to IL_5J7L_333

Geometric discrepancy: 0.0621

The information below is about IL_5J7L_333

Detailed Annotation

Double sheared

Broad Annotation

Double sheared

Motif group

IL_09705.15

Basepair signature

cWW-tSH-tHS-cWW

Number of instances in this motif group

34

Unit IDs

9QEG|1|A|C|2377
9QEG|1|A|G|2378
9QEG|1|A|A|2379
9QEG|1|A|G|2380
*
9QEG|1|A|C|2391
9QEG|1|A|G|2392
9QEG|1|A|A|2393
9QEG|1|A|G|2394

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 3

Large ribosomal subunit protein bL35

Chain U

Large ribosomal subunit protein bL27