IL_9QEG_093

3D structure

PDB id

9QEG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the 70S ribosome of a MLSb sensitive S. aureus strain "KES34" in complex with solithromycin

Experimental method

ELECTRON MICROSCOPY

Resolution

2.21 Å

Loop

Sequence

GAG*UGAC

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9QEG_093 not in the Motif Atlas

Homologous match to IL_4WF9_107

Geometric discrepancy: 0.0841

The information below is about IL_4WF9_107

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_05502.1

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

6

Unit IDs

9QEG|1|A|G|2863
9QEG|1|A|A|2864
9QEG|1|A|G|2865
*
9QEG|1|A|U|2891
9QEG|1|A|G|2892
9QEG|1|A|A|2893
9QEG|1|A|C|2894

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain D

Large ribosomal subunit protein uL3

Chain L

Large ribosomal subunit protein bL17

Chain N

Large ribosomal subunit protein bL19