IL_9QEG_096

3D structure

PDB id

9QEG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the 70S ribosome of a MLSb sensitive S. aureus strain "KES34" in complex with solithromycin

Experimental method

ELECTRON MICROSCOPY

Resolution

2.21 Å

Loop

Sequence

GU*AAC

Length

5 nucleotides

Bulged bases

9QEG|1|Aa|A|405

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9QEG_096 not in the Motif Atlas

Homologous match to IL_5J7L_002

Geometric discrepancy: 0.069

The information below is about IL_5J7L_002

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_31462.7

Basepair signature

cWW-L-cWW

Number of instances in this motif group

132

Unit IDs

9QEG|1|Aa|G|45
9QEG|1|Aa|U|46
*
9QEG|1|Aa|A|404
9QEG|1|Aa|A|405
9QEG|1|Aa|C|406

Current chains

Chain Aa

16S ribosomal RNA

Nearby chains

Chain Ap

Small ribosomal subunit protein bS16