IL_9QEG_102

3D structure

PDB id

9QEG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the 70S ribosome of a MLSb sensitive S. aureus strain "KES34" in complex with solithromycin

Experimental method

ELECTRON MICROSCOPY

Resolution

2.21 Å

Loop

Sequence

CUACC*GAUG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9QEG_102 not in the Motif Atlas

Homologous match to IL_4LFB_008

Geometric discrepancy: 0.1123

The information below is about IL_4LFB_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_60988.1

Basepair signature

cWW-cWW-L-R-L-cWW

Number of instances in this motif group

7

Unit IDs

9QEG|1|Aa|C|132
9QEG|1|Aa|U|133
9QEG|1|Aa|A|134
9QEG|1|Aa|C|135
9QEG|1|Aa|C|136
*
9QEG|1|Aa|G|235
9QEG|1|Aa|A|236
9QEG|1|Aa|U|237
9QEG|1|Aa|G|238

Current chains

Chain Aa

16S ribosomal RNA

Nearby chains

Chain Ap

Small ribosomal subunit protein bS16

Chain At

Small ribosomal subunit protein bS20