IL_9QEG_125
3D structure
- PDB id
- 9QEG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the 70S ribosome of a MLSb sensitive S. aureus strain "KES34" in complex with solithromycin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.21 Å
Loop
- Sequence
- GGGAUC*GUC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9QEG_125 not in the Motif Atlas
- Geometric match to IL_8P9A_423
- Geometric discrepancy: 0.1398
- The information below is about IL_8P9A_423
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_31359.1
- Basepair signature
- cWW-L-cWW-L-cWW-L
- Number of instances in this motif group
- 4
Unit IDs
9QEG|1|Aa|G|782
9QEG|1|Aa|G|783
9QEG|1|Aa|G|784
9QEG|1|Aa|A|785
9QEG|1|Aa|U|786
9QEG|1|Aa|C|787
*
9QEG|1|Aa|G|811
9QEG|1|Aa|U|812
9QEG|1|Aa|C|813
Current chains
- Chain Aa
- 16S ribosomal RNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain Ak
- Small ribosomal subunit protein uS11
- Chain C
- Large ribosomal subunit protein uL2
Coloring options: