IL_9QEG_142

3D structure

PDB id

9QEG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the 70S ribosome of a MLSb sensitive S. aureus strain "KES34" in complex with solithromycin

Experimental method

ELECTRON MICROSCOPY

Resolution

2.21 Å

Loop

Sequence

GUC*GUC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9QEG_142 not in the Motif Atlas

Homologous match to IL_4LFB_069

Geometric discrepancy: 0.1362

The information below is about IL_4LFB_069

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_01003.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

174

Unit IDs

9QEG|1|Aa|G|1415
9QEG|1|Aa|U|1416
9QEG|1|Aa|C|1417
*
9QEG|1|Aa|G|1505
9QEG|1|Aa|U|1506
9QEG|1|Aa|C|1507

Current chains

Chain Aa

16S ribosomal RNA

Nearby chains

Chain 9

A-site tRNA molecule

Chain d

mRNA molecule