IL_9QEH_026

3D structure

PDB id

9QEH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the A2085-methylated 50S ribosome of a MLSb resistant S. aureus strain "MNY196" in complex with solithromycin

Experimental method

ELECTRON MICROSCOPY

Resolution

2.08 Å

Loop

Sequence

UGAUG*UUAA

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9QEH_026 not in the Motif Atlas

Geometric match to IL_4WF9_029

Geometric discrepancy: 0.2654

The information below is about IL_4WF9_029

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_01742.1

Basepair signature

cWW-L-cWW-R-cWW

Number of instances in this motif group

3

Unit IDs

9QEH|1|A|U|889
9QEH|1|A|G|890
9QEH|1|A|A|891
9QEH|1|A|U|892
9QEH|1|A|G|893
*
9QEH|1|A|U|975
9QEH|1|A|U|976
9QEH|1|A|A|977
9QEH|1|A|A|978

Current chains

Chain A

23S rRNA

Nearby chains

Chain X

Large ribosomal subunit protein uL30