IL_9QEH_048

3D structure

PDB id

9QEH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the A2085-methylated 50S ribosome of a MLSb resistant S. aureus strain "MNY196" in complex with solithromycin

Experimental method

ELECTRON MICROSCOPY

Resolution

2.08 Å

Loop

Sequence

CGAUG*CUAG

Length

9 nucleotides

Bulged bases

9QEH|1|A|U|1464

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9QEH_048 not in the Motif Atlas

Homologous match to IL_4WF9_054

Geometric discrepancy: 0.4579

The information below is about IL_4WF9_054

Detailed Annotation

Other IL

Broad Annotation

Other IL

Motif group

IL_74317.1

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

8

Unit IDs

9QEH|1|A|C|1461
9QEH|1|A|G|1462
9QEH|1|A|A|1463
9QEH|1|A|U|1464
9QEH|1|A|G|1465
*
9QEH|1|A|C|1624
9QEH|1|A|U|1625
9QEH|1|A|A|1626
9QEH|1|A|G|1627

Current chains

Chain A

23S rRNA

Nearby chains