IL_9QEH_050

3D structure

PDB id

9QEH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the A2085-methylated 50S ribosome of a MLSb resistant S. aureus strain "MNY196" in complex with solithromycin

Experimental method

ELECTRON MICROSCOPY

Resolution

2.08 Å

Loop

Sequence

AUAG*UGAUU

Length

9 nucleotides

Bulged bases

9QEH|1|A|U|1601

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9QEH_050 not in the Motif Atlas

Homologous match to IL_9DFE_056

Geometric discrepancy: 0.1681

The information below is about IL_9DFE_056

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_74317.1

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

8

Unit IDs

9QEH|1|A|A|1481
9QEH|1|A|U|1482
9QEH|1|A|A|1483
9QEH|1|A|G|1484
*
9QEH|1|A|U|1598
9QEH|1|A|G|1599
9QEH|1|A|A|1600
9QEH|1|A|U|1601
9QEH|1|A|U|1602

Current chains

Chain A

23S rRNA

Nearby chains