IL_9QEH_102
3D structure
- PDB id
- 9QEH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the A2085-methylated 50S ribosome of a MLSb resistant S. aureus strain "MNY196" in complex with solithromycin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.08 Å
Loop
- Sequence
- UCG*CCG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9QEH_102 not in the Motif Atlas
- Homologous match to IL_7A0S_107
- Geometric discrepancy: 0.1067
- The information below is about IL_7A0S_107
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- Isolated non-canonical cWW pair
- Motif group
- IL_71625.4
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 95
Unit IDs
9QEH|1|B|U|78
9QEH|1|B|C|79
9QEH|1|B|G|80
*
9QEH|1|B|C|91
9QEH|1|B|C|92
9QEH|1|B|G|93
Current chains
- Chain B
- 5S rRNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain K
- Large ribosomal subunit protein uL16
- Chain T
- 50S ribosomal protein L25
- Chain X
- Large ribosomal subunit protein uL30
Coloring options: