IL_9QIW_011

3D structure

PDB id

9QIW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human pre-60S - State 3

Experimental method

ELECTRON MICROSCOPY

Resolution

3.04 Å

Loop

Sequence

CCGCUCGUGG*CGGCG

Length

15 nucleotides

Bulged bases

9QIW|1|L5|G|188

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QIW|1|L5|C|180
9QIW|1|L5|C|181
9QIW|1|L5|G|182
9QIW|1|L5|C|183
9QIW|1|L5|U|184
9QIW|1|L5|C|185
9QIW|1|L5|G|186
9QIW|1|L5|U|187
9QIW|1|L5|G|188
9QIW|1|L5|G|189
*
9QIW|1|L5|C|252
9QIW|1|L5|G|253
9QIW|1|L5|G|254
9QIW|1|L5|C|255
9QIW|1|L5|G|256

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LL

60S ribosomal protein L13

Chain Lh

60S ribosomal protein L35

Chain Lj

Large ribosomal subunit protein eL37