3D structure

PDB id
9QIW (explore in PDB, NAKB, or RNA 3D Hub)
Description
Human pre-60S - State 3
Experimental method
ELECTRON MICROSCOPY
Resolution
3.04 Å

Loop

Sequence
GG*CUC
Length
5 nucleotides
Bulged bases
9QIW|1|L5|U|2769
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_9QIW_076 not in the Motif Atlas
Homologous match to IL_8CRE_070
Geometric discrepancy: 0.4704
The information below is about IL_8CRE_070
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_82107.5
Basepair signature
cWW-cWW
Number of instances in this motif group
31

Unit IDs

9QIW|1|L5|G|2549
9QIW|1|L5|G|2550
*
9QIW|1|L5|C|2768
9QIW|1|L5|U|2769
9QIW|1|L5|C|2770

Current chains

Chain L5
28S rRNA

Nearby chains

Chain Lg
60S ribosomal protein L34

Coloring options:


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