IL_9QIW_099

3D structure

PDB id

9QIW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human pre-60S - State 3

Experimental method

ELECTRON MICROSCOPY

Resolution

3.04 Å

Loop

Sequence

UAG*UGGG

Length

7 nucleotides

Bulged bases

9QIW|1|L5|G|4183

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9QIW_099 not in the Motif Atlas

Homologous match to IL_8CRE_100

Geometric discrepancy: 0.3405

The information below is about IL_8CRE_100

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_85599.2

Basepair signature

cWW-tHS-cWW

Number of instances in this motif group

9

Unit IDs

9QIW|1|L5|U|3927
9QIW|1|L5|A|3928
9QIW|1|L5|G|3929
*
9QIW|1|L5|U|4181
9QIW|1|L5|G|4182
9QIW|1|L5|G|4183
9QIW|1|L5|G|4184

Current chains

Chain L5

28S rRNA

Nearby chains