3D structure

PDB id
9QIW (explore in PDB, NAKB, or RNA 3D Hub)
Description
Human pre-60S - State 3
Experimental method
ELECTRON MICROSCOPY
Resolution
3.04 Å

Loop

Sequence
CAUUG*CCAAGCG
Length
12 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9QIW|1|L5|C|4466
9QIW|1|L5|A|4467
9QIW|1|L5|U|4468
9QIW|1|L5|U|4469
9QIW|1|L5|G|4470
*
9QIW|1|L5|C|4485
9QIW|1|L5|C|4486
9QIW|1|L5|A|4487
9QIW|1|L5|A|4488
9QIW|1|L5|G|4489
9QIW|1|L5|C|4490
9QIW|1|L5|G|4491

Current chains

Chain L5
28S rRNA

Nearby chains

Chain CC
Guanine nucleotide-binding protein-like 3
Chain CD
GTP-binding protein 4
Chain CE
Protein LLP homolog
Chain CH
Ribosome biogenesis protein NSA2 homolog
Chain LB
60S ribosomal protein L3
Chain LH
60S ribosomal protein L9
Chain LV
60S ribosomal protein L23

Coloring options:

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