IL_9QIW_131
3D structure
- PDB id
- 9QIW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human pre-60S - State 3
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.04 Å
Loop
- Sequence
- GCG*CC
- Length
- 5 nucleotides
- Bulged bases
- 9QIW|1|L5|C|4900
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9QIW_131 not in the Motif Atlas
- Geometric match to IL_3W3S_001
- Geometric discrepancy: 0.3169
- The information below is about IL_3W3S_001
- Detailed Annotation
- Single bulged C
- Broad Annotation
- No text annotation
- Motif group
- IL_61258.15
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 41
Unit IDs
9QIW|1|L5|G|4899
9QIW|1|L5|C|4900
9QIW|1|L5|G|4901
*
9QIW|1|L5|C|4920
9QIW|1|L5|C|4921
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain CE
- Protein LLP homolog
Coloring options: