IL_9QLO_060
3D structure
- PDB id
- 9QLO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- NMT1-NAC bound human RNC with full length ARF1 - State 1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.47 Å
Loop
- Sequence
- CGGUAA*UAAAUG
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9QLO_060 not in the Motif Atlas
- Homologous match to IL_8GLP_291
- Geometric discrepancy: 0.1658
- The information below is about IL_8GLP_291
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_46203.1
- Basepair signature
- cWW-L-R-L-R-L-R-L-R-cWW
- Number of instances in this motif group
- 2
Unit IDs
9QLO|1|L5|C|1732
9QLO|1|L5|G|1733
9QLO|1|L5|G|1734
9QLO|1|L5|U|1735
9QLO|1|L5|A|1736
9QLO|1|L5|A|1737
*
9QLO|1|L5|U|1792
9QLO|1|L5|A|1793
9QLO|1|L5|A|1794
9QLO|1|L5|A|1795
9QLO|1|L5|U|1796
9QLO|1|L5|G|1797
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain L7
- 5S ribosomal RNA; 5S rRNA
- Chain LD
- 60S ribosomal protein L5
- Chain LF
- Large ribosomal subunit protein uL30
- Chain LI
- Ribosomal protein uL16-like
- Chain LT
- 60S ribosomal protein L21
Coloring options: