IL_9QLO_187
3D structure
- PDB id
- 9QLO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- NMT1-NAC bound human RNC with full length ARF1 - State 1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.47 Å
Loop
- Sequence
- CUGACC*GGGAUG
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9QLO_187 not in the Motif Atlas
- Geometric match to IL_8OI5_028
- Geometric discrepancy: 0.36
- The information below is about IL_8OI5_028
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_28265.2
- Basepair signature
- cWW-tSH-tSH-tHS-cWW-cWW
- Number of instances in this motif group
- 9
Unit IDs
9QLO|1|S2|C|188
9QLO|1|S2|U|189
9QLO|1|S2|G|190
9QLO|1|S2|A|191
9QLO|1|S2|C|192
9QLO|1|S2|C|193
*
9QLO|1|S2|G|206
9QLO|1|S2|G|207
9QLO|1|S2|G|208
9QLO|1|S2|A|209
9QLO|1|S2|U|210
9QLO|1|S2|G|211
Current chains
- Chain S2
- 18S rRNA
Nearby chains
- Chain SI
- 40S ribosomal protein S8
Coloring options: