IL_9QQA_007
3D structure
- PDB id
- 9QQA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ternary complex of translating ribosome, NAC and NMT1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- UACGCA*UGAAA
- Length
- 11 nucleotides
- Bulged bases
- 9QQA|1|A2|C|65, 9QQA|1|A2|C|67
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9QQA_007 not in the Motif Atlas
- Geometric match to IL_8P9A_379
- Geometric discrepancy: 0.1813
- The information below is about IL_8P9A_379
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_21667.2
- Basepair signature
- cWW-tSH-L-R-L-cWW
- Number of instances in this motif group
- 3
Unit IDs
9QQA|1|A2|U|63
9QQA|1|A2|A|64
9QQA|1|A2|C|65
9QQA|1|A2|G|66
9QQA|1|A2|C|67
9QQA|1|A2|A|68
*
9QQA|1|A2|U|81
9QQA|1|A2|G|82
9QQA|1|A2|A|83
9QQA|1|A2|A|84
9QQA|1|A2|A|85
Current chains
- Chain A2
- 18S rRNA
Nearby chains
- Chain Af
- 40S ribosomal protein S6
- Chain Ax
- 40S ribosomal protein S24
- Chain BW
- Ribosomal protein L24
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