IL_9QQA_036

3D structure

PDB id

9QQA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ternary complex of translating ribosome, NAC and NMT1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

CCUCUCGGCG*CCCGAAG

Length

17 nucleotides

Bulged bases

9QQA|1|A2|U|748, 9QQA|1|A2|C|749

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QQA|1|A2|C|746
9QQA|1|A2|C|747
9QQA|1|A2|U|748
9QQA|1|A2|C|749
9QQA|1|A2|U|750
9QQA|1|A2|C|751
9QQA|1|A2|G|752
9QQA|1|A2|G|753
9QQA|1|A2|C|754
9QQA|1|A2|G|755
*
9QQA|1|A2|C|791
9QQA|1|A2|C|792
9QQA|1|A2|C|793
9QQA|1|A2|G|794
9QQA|1|A2|A|795
9QQA|1|A2|A|796
9QQA|1|A2|G|797

Current chains

Chain A2

18S rRNA

Nearby chains

Chain Ad

40S ribosomal protein S4

Chain Af

40S ribosomal protein S6

Chain Ag

40S ribosomal protein S7

Chain Ak

Small ribosomal subunit protein uS17