IL_9QQA_038

3D structure

PDB id

9QQA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ternary complex of translating ribosome, NAC and NMT1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

UUGAAAAAA(PSU)(PSU)*ACCGCAGCUA

Length

21 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QQA|1|A2|U|806
9QQA|1|A2|U|807
9QQA|1|A2|G|808
9QQA|1|A2|A|809
9QQA|1|A2|A|810
9QQA|1|A2|A|811
9QQA|1|A2|A|812
9QQA|1|A2|A|813
9QQA|1|A2|A|814
9QQA|1|A2|PSU|815
9QQA|1|A2|PSU|816
*
9QQA|1|A2|A|850
9QQA|1|A2|C|851
9QQA|1|A2|C|852
9QQA|1|A2|G|853
9QQA|1|A2|C|854
9QQA|1|A2|A|855
9QQA|1|A2|G|856
9QQA|1|A2|C|857
9QQA|1|A2|U|858
9QQA|1|A2|A|859

Current chains

Chain A2

18S rRNA

Nearby chains

Chain Ad

40S ribosomal protein S4

Chain Ai

Small ribosomal subunit protein uS4

Chain Ak

Small ribosomal subunit protein uS17

Chain Av

Small ribosomal subunit protein uS8