IL_9QQA_048
3D structure
- PDB id
- 9QQA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ternary complex of translating ribosome, NAC and NMT1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- AGG(PSU)(PSU)C*GUU
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9QQA_048 not in the Motif Atlas
- Geometric match to IL_8P9A_423
- Geometric discrepancy: 0.1474
- The information below is about IL_8P9A_423
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_31359.1
- Basepair signature
- cWW-L-cWW-L-cWW-L
- Number of instances in this motif group
- 4
Unit IDs
9QQA|1|A2|A|1043
9QQA|1|A2|G|1044
9QQA|1|A2|G|1045
9QQA|1|A2|PSU|1046
9QQA|1|A2|PSU|1047
9QQA|1|A2|C|1048
*
9QQA|1|A2|G|1072
9QQA|1|A2|U|1073
9QQA|1|A2|U|1074
Current chains
- Chain A2
- 18S rRNA
Nearby chains
- Chain AE
- eS26
- Chain An
- Small ribosomal subunit protein uS11
- Chain B5
- Large subunit ribosomal RNA; LSU rRNA
- Chain BA
- Large ribosomal subunit protein uL2
- Chain Bp
- 60S ribosomal protein L37a
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