IL_9QQA_065
3D structure
- PDB id
- 9QQA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ternary complex of translating ribosome, NAC and NMT1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- UGG*UCUGUGA
- Length
- 10 nucleotides
- Bulged bases
- 9QQA|1|A2|U|1495, 9QQA|1|A2|G|1498
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9QQA_065 not in the Motif Atlas
- Geometric match to IL_8P9A_440
- Geometric discrepancy: 0.1271
- The information below is about IL_8P9A_440
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_93811.1
- Basepair signature
- cWW-tHS-L-R-cWW-L
- Number of instances in this motif group
- 3
Unit IDs
9QQA|1|A2|U|1334
9QQA|1|A2|G|1335
9QQA|1|A2|G|1336
*
9QQA|1|A2|U|1493
9QQA|1|A2|C|1494
9QQA|1|A2|U|1495
9QQA|1|A2|G|1496
9QQA|1|A2|U|1497
9QQA|1|A2|G|1498
9QQA|1|A2|A|1499
Current chains
- Chain A2
- 18S rRNA
Nearby chains
- Chain AG
- Small ribosomal subunit protein uS14
- Chain Ac
- 40S ribosomal protein S3
- Chain Aj
- S10_plectin domain-containing protein
- Chain At
- Small ribosomal subunit protein uS10
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