IL_9QQA_128

3D structure

PDB id

9QQA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ternary complex of translating ribosome, NAC and NMT1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

AAGG*CAGCAGCAGCU

Length

15 nucleotides

Bulged bases

9QQA|1|B5|A|831, 9QQA|1|B5|A|834, 9QQA|1|B5|C|836

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QQA|1|B5|A|726
9QQA|1|B5|A|727
9QQA|1|B5|G|728
9QQA|1|B5|G|729
*
9QQA|1|B5|C|827
9QQA|1|B5|A|828
9QQA|1|B5|G|829
9QQA|1|B5|C|830
9QQA|1|B5|A|831
9QQA|1|B5|G|832
9QQA|1|B5|C|833
9QQA|1|B5|A|834
9QQA|1|B5|G|835
9QQA|1|B5|C|836
9QQA|1|B5|U|837

Current chains

Chain B5

28S rRNA

Nearby chains

Chain BC

Large ribosomal subunit protein uL4

Chain BM

60S ribosomal protein L14

Chain BS

Large ribosomal subunit protein eL20