IL_9QQA_140

3D structure

PDB id

9QQA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ternary complex of translating ribosome, NAC and NMT1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

CGGGG*CGCCGUG

Length

12 nucleotides

Bulged bases

9QQA|1|B5|G|1303, 9QQA|1|B5|C|1322

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QQA|1|B5|C|1301
9QQA|1|B5|G|1302
9QQA|1|B5|G|1303
9QQA|1|B5|G|1304
9QQA|1|B5|G|1305
*
9QQA|1|B5|C|1320
9QQA|1|B5|G|1321
9QQA|1|B5|C|1322
9QQA|1|B5|C|1323
9QQA|1|B5|G|1324
9QQA|1|B5|U|1325
9QQA|1|B5|G|1326

Current chains

Chain B5

28S rRNA

Nearby chains

Chain BC

Large ribosomal subunit protein uL4

Chain BL

Large ribosomal subunit protein eL13

Chain BN

Ribosomal protein L15

Chain Ba

60S ribosomal protein L27a