IL_9QQA_186

3D structure

PDB id

9QQA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ternary complex of translating ribosome, NAC and NMT1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

(OMU)GAAC*GAA

Length

8 nucleotides

Bulged bases

9QQA|1|B5|A|2271

QA status

Modified nucleotides: OMU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9QQA_186 not in the Motif Atlas

Geometric match to IL_7A0S_047

Geometric discrepancy: 0.2139

The information below is about IL_7A0S_047

Detailed Annotation

C-loop

Broad Annotation

No text annotation

Motif group

IL_06671.1

Basepair signature

cWW-L-cWW-L-L

Number of instances in this motif group

10

Unit IDs

9QQA|1|B5|OMU|2258
9QQA|1|B5|G|2259
9QQA|1|B5|A|2260
9QQA|1|B5|A|2261
9QQA|1|B5|C|2262
*
9QQA|1|B5|G|2270
9QQA|1|B5|A|2271
9QQA|1|B5|A|2272

Current chains

Chain B5

28S rRNA

Nearby chains

Chain BP

Large ribosomal subunit protein uL22

Chain BR

Ribosomal protein L19

Chain Bl

60S ribosomal protein L39-like