IL_9QQA_227
3D structure
- PDB id
- 9QQA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ternary complex of translating ribosome, NAC and NMT1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- U(PSU)GA*(PSU)ACA
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9QQA_227 not in the Motif Atlas
- Geometric match to IL_7WIE_001
- Geometric discrepancy: 0.2016
- The information below is about IL_7WIE_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_15043.1
- Basepair signature
- cWW-cWW-cWH-cWW
- Number of instances in this motif group
- 4
Unit IDs
9QQA|1|B5|U|4041
9QQA|1|B5|PSU|4042
9QQA|1|B5|G|4043
9QQA|1|B5|A|4044
*
9QQA|1|B5|PSU|4058
9QQA|1|B5|A|4059
9QQA|1|B5|C|4060
9QQA|1|B5|A|4061
Current chains
- Chain B5
- 28S rRNA
Nearby chains
- Chain BQ
- eL18
- Chain BT
- 60S ribosomal protein L21
- Chain Bb
- 60S ribosomal protein L29
- Chain Bo
- Large ribosomal subunit protein eL42
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