IL_9QQA_250

3D structure

PDB id

9QQA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ternary complex of translating ribosome, NAC and NMT1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GAAG*CU

Length

6 nucleotides

Bulged bases

9QQA|1|B5|A|4487, 9QQA|1|B5|A|4488

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9QQA_250 not in the Motif Atlas

Geometric match to IL_8ZAU_001

Geometric discrepancy: 0.251

The information below is about IL_8ZAU_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_05670.1

Basepair signature

cWW-cWW

Number of instances in this motif group

9

Unit IDs

9QQA|1|B5|G|4486
9QQA|1|B5|A|4487
9QQA|1|B5|A|4488
9QQA|1|B5|G|4489
*
9QQA|1|B5|C|4697
9QQA|1|B5|U|4698

Current chains

Chain B5

28S rRNA

Nearby chains