3D structure

PDB id
9QQB (explore in PDB, NAKB, or RNA 3D Hub)
Description
Quaternary complex of a translating ribosome, NAC, NMT1, and NatA
Experimental method
ELECTRON MICROSCOPY
Resolution
3.43 Å

Loop

Sequence
CCACUC*GGA(OMG)
Length
10 nucleotides
Bulged bases
9QQB|1|A2|G|508
QA status
Modified nucleotides: OMG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9QQB|1|A2|C|492
9QQB|1|A2|C|493
9QQB|1|A2|A|494
9QQB|1|A2|C|495
9QQB|1|A2|U|496
9QQB|1|A2|C|497
*
9QQB|1|A2|G|507
9QQB|1|A2|G|508
9QQB|1|A2|A|509
9QQB|1|A2|OMG|510

Current chains

Chain A2
18S rRNA

Nearby chains

Chain Ad
40S ribosomal protein S4
Chain Ai
Small ribosomal subunit protein uS4
Chain Ax
40S ribosomal protein S24

Coloring options:

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