IL_9QQB_039
3D structure
- PDB id
- 9QQB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Quaternary complex of a translating ribosome, NAC, NMT1, and NatA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.43 Å
Loop
- Sequence
- GAAAAAA(PSU)(PSU)*ACCGCAGC
- Length
- 17 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9QQB_039 not in the Motif Atlas
- Homologous match to IL_9H3G_194
- Geometric discrepancy: 0.1857
- The information below is about IL_9H3G_194
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_59049.5
- Basepair signature
- cWW-cWW-L-R-L-R-L-R-L-R-L-cWW-L
- Number of instances in this motif group
- 5
Unit IDs
9QQB|1|A2|G|808
9QQB|1|A2|A|809
9QQB|1|A2|A|810
9QQB|1|A2|A|811
9QQB|1|A2|A|812
9QQB|1|A2|A|813
9QQB|1|A2|A|814
9QQB|1|A2|PSU|815
9QQB|1|A2|PSU|816
*
9QQB|1|A2|A|850
9QQB|1|A2|C|851
9QQB|1|A2|C|852
9QQB|1|A2|G|853
9QQB|1|A2|C|854
9QQB|1|A2|A|855
9QQB|1|A2|G|856
9QQB|1|A2|C|857
Current chains
- Chain A2
- 18S rRNA
Nearby chains
- Chain Ad
- 40S ribosomal protein S4
- Chain Ai
- Small ribosomal subunit protein uS4
- Chain Ak
- Small ribosomal subunit protein uS17
- Chain Av
- Small ribosomal subunit protein uS8
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