IL_9QQB_039

3D structure

PDB id

9QQB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Quaternary complex of a translating ribosome, NAC, NMT1, and NatA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.43 Å

Loop

Sequence

GAAAAAA(PSU)(PSU)*ACCGCAGC

Length

17 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QQB|1|A2|G|808
9QQB|1|A2|A|809
9QQB|1|A2|A|810
9QQB|1|A2|A|811
9QQB|1|A2|A|812
9QQB|1|A2|A|813
9QQB|1|A2|A|814
9QQB|1|A2|PSU|815
9QQB|1|A2|PSU|816
*
9QQB|1|A2|A|850
9QQB|1|A2|C|851
9QQB|1|A2|C|852
9QQB|1|A2|G|853
9QQB|1|A2|C|854
9QQB|1|A2|A|855
9QQB|1|A2|G|856
9QQB|1|A2|C|857

Current chains

Chain A2

18S rRNA

Nearby chains

Chain Ad

40S ribosomal protein S4

Chain Ai

Small ribosomal subunit protein uS4

Chain Ak

Small ribosomal subunit protein uS17

Chain Av

Small ribosomal subunit protein uS8