IL_9QQB_056

3D structure

PDB id

9QQB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Quaternary complex of a translating ribosome, NAC, NMT1, and NatA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.43 Å

Loop

Sequence

GGA*U(PSU)

Length

5 nucleotides

Bulged bases

9QQB|1|A2|G|1208

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9QQB_056 not in the Motif Atlas

Geometric match to IL_4LFB_036

Geometric discrepancy: 0.2148

The information below is about IL_4LFB_036

Detailed Annotation

Single bulged G

Broad Annotation

No text annotation

Motif group

IL_28408.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

69

Unit IDs

9QQB|1|A2|G|1207
9QQB|1|A2|G|1208
9QQB|1|A2|A|1209
*
9QQB|1|A2|U|1692
9QQB|1|A2|PSU|1693

Current chains

Chain A2

18S rRNA

Nearby chains

Chain AE

eS26