IL_9QQB_057
3D structure
- PDB id
- 9QQB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Quaternary complex of a translating ribosome, NAC, NMT1, and NatA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.43 Å
Loop
- Sequence
- ACCA*UCCCU
- Length
- 9 nucleotides
- Bulged bases
- 9QQB|1|A2|C|1216, 9QQB|1|A2|C|1217
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9QQB_057 not in the Motif Atlas
- Geometric match to IL_8CRE_445
- Geometric discrepancy: 0.1108
- The information below is about IL_8CRE_445
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_63596.12
- Basepair signature
- cWW-cWS-cSH-tWH-cWW-L
- Number of instances in this motif group
- 22
Unit IDs
9QQB|1|A2|A|1215
9QQB|1|A2|C|1216
9QQB|1|A2|C|1217
9QQB|1|A2|A|1218
*
9QQB|1|A2|U|1682
9QQB|1|A2|C|1683
9QQB|1|A2|C|1684
9QQB|1|A2|C|1685
9QQB|1|A2|U|1686
Current chains
- Chain A2
- 18S rRNA
Nearby chains
- Chain AB
- Small ribosomal subunit protein eS28
- Chain AE
- eS26
- Chain AT
- Transfer RNA; tRNA
- Chain Ae
- Small ribosomal subunit protein uS7
- Chain Ap
- Small ribosomal subunit protein uS9
- Chain At
- Small ribosomal subunit protein uS10
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