IL_9QQB_066
3D structure
- PDB id
- 9QQB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Quaternary complex of a translating ribosome, NAC, NMT1, and NatA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.43 Å
Loop
- Sequence
- UGCAU*AUG
- Length
- 8 nucleotides
- Bulged bases
- 9QQB|1|A2|C|1332
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9QQB_066 not in the Motif Atlas
- Geometric match to IL_4LFB_044
- Geometric discrepancy: 0.1259
- The information below is about IL_4LFB_044
- Detailed Annotation
- Isolated cWS basepair
- Broad Annotation
- No text annotation
- Motif group
- IL_76319.5
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 3
Unit IDs
9QQB|1|A2|U|1330
9QQB|1|A2|G|1331
9QQB|1|A2|C|1332
9QQB|1|A2|A|1333
9QQB|1|A2|U|1334
*
9QQB|1|A2|A|1499
9QQB|1|A2|U|1500
9QQB|1|A2|G|1501
Current chains
- Chain A2
- 18S rRNA
Nearby chains
- Chain AC
- Ubiquitin-ribosomal protein eS31 fusion protein
- Chain AG
- Small ribosomal subunit protein uS14
- Chain Ac
- 40S ribosomal protein S3
- Chain Aj
- S10_plectin domain-containing protein
- Chain At
- Small ribosomal subunit protein uS10
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